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Add marker combinations to a binary geno-pheno matrix

Source: R/get_binary_matrix.R
get_combo_matrix.Rd

Given a geno-pheno binary marker matrix, output by get_binary_matrix, this function identifies marker combination, and adds combination ids, and the count of markers detected per sample, as new columns.

Usage

get_combo_matrix(binary_matrix, assay = NULL)

Arguments

binary_matrix

A geno-pheno binary matrix, output by get_binary_matrix

assay

(optional) Name of an assay column to filter on, so that the matrix returned only includes samples with assay data of this type available

Examples

if (FALSE) { # \dontrun{
combo_matrix <- get_combo_matrix(binary_matrix)
} # }